BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E08SP1|AL425138
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1889 0.0
>3x_Contig1801
Length = 57606
Score = 1889 bits (949), Expect = 0.0
Identities = 975/983 (99%), Gaps = 3/983 (0%)
Strand = Plus / Minus
Query: 1 aagaaaactttgaaatggagaaaagaattcaagcctttacacgctgcattttctgaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15439 aagaaaactttgaaatggagaaaagaattcaagcctttacacgctgcattttctgaaact 15380
Query: 61 cacgattcgttgctcaatgatgtatgtgccatcactgtcagtgaagagaatgatcctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15379 cacgattcgttgctcaatgatgtatgtgccatcactgtcagtgaagagaatgatcctaac 15320
Query: 121 cagaaagttgtcagctggaacttgtatggattgttagtgaagcataaggaagtgtttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15319 cagaaagttgtcagctggaacttgtatggattgttagtgaagcataaggaagtgtttgaa 15260
Query: 181 gataccgacaaattcttgagattcaggattggtctaatggagcgcgggttgcaacttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15259 gataccgacaaattcttgagattcaggattggtctaatggagcgcgggttgcaacttttg 15200
Query: 241 gattttgcgagcgaggataactatttgatgacacaggtgcatgactatmacaatgtatct 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15199 gattttgcgagcgaggataactatttgatgacacaggtgcatgactataacaatgtatct 15140
Query: 301 atgtggaggttggaccctgccatcaagaaatgttccaaggccatcattgaggtgttccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15139 atgtggaggttggaccctgccatcaagaaatgttccaaggccatcattgaggtgttccag 15080
Query: 361 gacttctatccggaaacgttgttctctaagttcttcgtaaatgttccatacgtgatgact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15079 gacttctatccggaaacgttgttctctaagttcttcgtaaatgttccatacgtgatgact 15020
Query: 421 tggttatacgagattgttaagagatttgtctctgaagatactagaaagaagttcattgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15019 tggttatacgagattgttaagagatttgtctctgaagatactagaaagaagttcattgtg 14960
Query: 481 atgagtgatggtacgcaaatgaaggactacttgamagttcttccaaaagaatacggtggc 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 14959 atgagtgatggtacgcaaatgaaggactacttgaaagttcttccaaaagaatacggtggc 14900
Query: 541 gaa-stactttgaactcatctaagcttgamaatatcgaaccaaacgcttatgtttcttat 599
||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 14899 gaagctactttgaactcatctaagcttgaaaatatcgaaccaaacgcttatgtttcttat 14840
Query: 600 ttgctcactcaatgtggtggtgaagaaccagccgamaccacagccccagaacaagagaag 659
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 14839 ttgctcactcaatgtggtggtgaagaaccagccgaaaccacagccccagaacaagagaag 14780
Query: 660 gaaactgccactgcttgaattttgaaccgtctgaggcgctctttttcacaaacaactaca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14779 gaaactgccactgcttgaattttgaaccgtctgaggcgctctttttcacaaacaactaca 14720
Query: 720 actacaactaataactaatccatctttttctctaactctctcactgaccgatttaccctt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14719 actacaactaataactaatccatctttttctctaactctctcactgaccgatttaccctt 14660
Query: 780 tgtcataactaacatcttaatatgcagcttataaatttggtaaactaatatggataaata 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14659 tgtcataactaacatcttaatatgcagcttataaatttggtaaactaatatggataaata 14600
Query: 840 atgattcccccagtatatggagaaaactaataaacagaaattaaagactattacacacag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14599 atgattcccccagtatatggagaaaactaataaacagaaattaaagactattacacacag 14540
Query: 900 aaagtgtttctaaaagatggccattctttattgg-ccccggcacacgctgcctcagctgg 958
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 14539 aaagtgtttctaaaagatggccattctttattggcccccggcacacgctgcctcagctgg 14480
Query: 959 ag-cttattagcggaatatgaaa 980
|| ||||||||||||||||||||
Sbjct: 14479 agccttattagcggaatatgaaa 14457
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7175
Number of Sequences: 1807
Number of extensions: 7175
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)